Convert a hyp object to a reactable table
hyp_show(hyp_obj, simple = FALSE)
hyp_obj | A hyp object |
---|---|
simple | Use true to only include essential columns |
A reactable table
genesets <- msigdb_gsets("Homo sapiens", "C2", "CP:KEGG") signature <- c("IDH3B","DLST","PCK2","CS","PDHB","PCK1","PDHA1","LOC642502", "PDHA2","LOC283398","FH","SDHD","OGDH","SDHB","IDH3A","SDHC", "IDH2","IDH1","OGDHL","PC","SDHA","SUCLG1","SUCLA2","SUCLG2") hyp_obj <- hypeR(signature, genesets, background=2522) hyp_show(hyp_obj)