Print msigdb gsets information
msigdb_info()
msigdb_info()#> |------------------------------------------------------------------| #> | Via: R package msigdbr v7.2.1 | #> |------------------------------------------------------------------| #> | Available Species | #> |------------------------------------------------------------------| #> | Homo sapiens | #> | Mus musculus | #> | Drosophila melanogaster | #> | Gallus gallus | #> | Saccharomyces cerevisiae | #> | Bos taurus | #> | Caenorhabditis elegans | #> | Canis lupus familiaris | #> | Danio rerio | #> | Rattus norvegicus | #> | Sus scrofa | #> |------------------------------------------------------------------| #> | Available Genesets | #> |------------------------------------------------------------------| #> | Category Subcategory | Description | #> |------------------------------------------------------------------| #> | C1 | Positional | #> | C2 CGP | Chemical and Genetic Perturbations | #> | C2 CP | Canonical Pathways | #> | C2 CP:BIOCARTA | Canonical BIOCARTA | #> | C2 CP:KEGG | Canonical KEGG | #> | C2 CP:PID | Canonical PID | #> | C2 CP:REACTOME | Canonical REACTOME | #> | C3 MIR | Motif miRNA Targets | #> | C3 TFT | Motif Transcription Factor Targets | #> | C4 CGN | Cancer Gene Neighborhoods | #> | C4 CM | Cancer Modules | #> | C5 BP | GO Biological Process | #> | C5 CC | GO Cellular Component | #> | C5 MF | GO Molecular Function | #> | C6 | Oncogenic Signatures | #> | C7 | Immunologic Signatures | #> | H | Hallmark | #> |------------------------------------------------------------------| #> | Source: http://software.broadinstitute.org/gsea/msigdb | #> |------------------------------------------------------------------|