Meta interactive enrichment for all communities of the network

Source: R/enrichment.R

Meta interactive enrichment for all communities of the network

enrich_communities_interactive_meta(
  ig,
  genesets,
  restart = 0.5,
  fdr = 1,
  pval = 1,
  top = 1,
  mse = -inf,
  val = NULL
)

Arguments

ig

An igraph object
genesets

A named list of genesets
restart

Restart probability between 0-1
fdr

Passed to hypeR
pval

Passed to hypeR
top

Limit number of genesets shown
mse

Minimum shared edges threshold to visualize
val

A value to associate with genesets

Value

An visnetwork object