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Generate interactive dashboard of K2 Taxonomer results

Source: R/K2dashboard.R
K2dashboard.Rd

This function will generate an interactive dashboard of the annotated K2 Taxonomer results in a specified directory.

Usage

K2dashboard(
  K2res,
  analysis_name = "K2Taxonomer",
  about = TRUE,
  output_dir = "."
)

Arguments

K2res

A K2 class object.

analysis_name

Character string of the name of analysis to write files and generate title of report.

about

Logical. Whether to create an 'about' tab in the dashboard.

output_dir

Base directory to put report.

Value

Nothing. Writes files to a specified directory.

References

Reed ER, Monti S (2021). “Multi-resolution characterization of molecular taxonomies in bulk and single-cell transcriptomics data.” Nucleic Acids Research. doi:10.1093/nar/gkab552 , https://pubmed.ncbi.nlm.nih.gov/34226941/.