iEDGE report



index alteration_id alteration_description cis trans bipartite num_altered num_normal genes_in_alteration
1 AmplificationPeak1 1p34.2 (46/91) 36 (11/34) 12 165 RNA5SP46,RNA5SP45,RN7SL326P,MIR30C1,MIR30E,BMP8B,SNORA55,BMP8A,RNA5SP44,MYCBP,SNORA63,SNOU13,MIR5581,MEAF6,RNA5SP43,ATP6V0B,CDC20,COL9A2,CTPS1,DPH2,EDN2,FHL3,GRIK3,GUCA2A,GUCA2B,INPP5B,MPL,MTF1,MYCL,NDUFS5,NFYC,YBX1,POU3F1,PPT1,PTPRF,RLF,ST3GAL3,SLC2A1,SLC6A9,TIE1,DNALI1,B4GALT2,PABPC4,ARTN,KCNQ4,IPO13,KDM4A,RIMS3,ZMPSTE24,PPIE,PPIH,CAP1,SF3A3,EBNA1BP2,FOXJ3,SCMH1,SZT2,MACF1,HEYL,GNL2,ZNF691,UTP11L,HPCAL4,TRIT1,RHBDL2,C1ORF109,CDCA8,HIVEP3,OXCT2,RRAGC,LEPRE1,SMAP2,EXO5,ELOVL1,ZFP69B,C1ORF50,AKIRIN1,YRDC,PPCS,SNIP1,ZC3H12A,GJA9,HYI,ZMYND12,NT5C1A,MFSD2A,MED8,ERMAP,TMCO2,ZNF684,C1ORF122,TMEM125,MANEAL,CLDN19,WDR65,C1ORF210,CCDC24,CITED4,SLFNL1,RSPO1,EPHA10,RIMKLA,ZFP69,CCDC23,FAM183A,KIAA0754,CCDC30,FOXO6,MIR4255,MIR3659
2 AmplificationPeak2 1p12 (4/5) 1 (0/0) 24 153 HMGCS2,NOTCH2,ADAM30,PHGDH,REG4
3 AmplificationPeak3 1q21.3 (242/559) 311 (38/311) 59 118 MIR181A1HG,MIR4735,U3,MIR1278,SNOU109,RN7SKP126,RNA5SP73,RN7SKP156,RNA5SP72,SNORD112,RN7SL654P,RNA5SP71,RN7SKP229,RNA5SP70,KIAA1614,U6,MIR3121,LHX4,RN7SL230P,IFRG15,RN7SL374P,SNORA67,SNORA67,TOR3A,SNORA63,RNA5SP69,C1ORF220,LINC00083,MIR488,SCARNA3,SNOU13,RNA5SP68,RNA5SP67,SNORD78,GAS5,RN7SKP160,SNOU13,ANKRD45,SNOU13,TNFSF18,SNORD112,DNM3OS,SCARNA20,RN7SL425P,SNOU13,RN7SL269P,RN7SL333P,C1ORF112,F5,RNA5SP66,LINC00970,LINC00626,ANKRD36BP1,SFT2D2,MIR1255B2,SNOU13,RNA5SP65,POGK,MIR921,RNA5SP64,UCK2,TMCO1,SNORD112,U3,RNA5SP63,RNA5SP62,SNORD112,RN7SL861P,C1ORF111,MIR556,RNA5SP61,MIR4654,RN7SL466P,RPL31P11,FCGR2C,SDHC,MIR5187,ADAMTS4,ACA64,F11R,DCAF8,KCNJ9,SNORD64,OR10J4,RNA5SP60,RN7SL612P,MIR765,SNOU13,BGLAP,SNORA26,SCARNA4,SNORA42,SNOU13,MIR555,GBAP1,EFNA3,MIR4258,SNORD59,SNORA58,C1ORF189,RN7SL431P,MIR5698,U3,SNOU13,RN7SL372P,RN7SL44P,S100A7L2,SPRR2B,SNORA31,LINC00302,NBPF18P,THEM4,LINGO4,CELF3,MIR554,SNORA44,RNY4P25,RN7SL444P,MLLT11,SNORA40,RN7SL600P,RN7SL473P,C1ORF138,LINC00568,SNOU13,RN7SL480P,OTUD7B,HIST2H3A,HIST2H2AA3,HIST2H3C,FAM72C,FCGR1C,RNA5SP59,NBPF15,RNA5SP58,NBPF24,RN7SL261P,ACP6,LINC00624,HYDIN2,RNA5SP57,PDZK1P1,RNF115,NUDT17,GNRHR2,NBPF10,SEC22B,RN7SKP88,LINC00623,NBPF8,SRGAP2B,ANKRD20A12P,FCGR1B,HIST2H2BA,ABL2,ADAR,ALDH9A1,APCS,APOA2,FASLG,ARNT,ASTN1,SERPINC1,ATP1A2,ATP1A4,ATP1B1,BCL9,CACNA1E,CASQ1,CD1A,CD1B,CD1C,CD1D,CD1E,CD247,CD5L,CD48,CHRNB2,CKS1B,CLK2,COPA,CRABP2,CRP,CTSK,CTSS,DHX9,DPT,ECM1,EFNA1,EFNA4,ENSA,ETV3,F13B,FCER1A,FCER1G,FCGR1A,FCGR2A,FCGR2B,FCGR3A,FCGR3B,FDPS,FLG,FMO1,FMO2,FMO3,FMO4,FMO5,NR5A2,DARC,GBA,GJA5,GJA8,GLUL,HDGF,CFH,CFHR1,CFHR2,MR1,HSPA6,IFI16,IL6R,ILF2,INSRR,IVL,KCNJ10,KCNN3,LAMC1,LAMC2,LMNA,LMX1A,LOR,LY9,MCL1,SMCP,MEF2D,MGST3,MNDA,MPZ,MTX1,MUC1,MYOC,NCF2,NDUFS2,NHLH1,NIT1,NOTCH2,NPR1,NTRK1,DDR2,PBX1,PDC,PDZK1,PFDN2,PIGC,PI4KB,PKLR,PLA2G4A,PRRX1,POU2F1,PPOX,PRCC,PRKAB2,PSMB4,PSMD4,PTGS2,QSOX1,PTPRC,PEX19,RAB13,RFX5,RGS1,RGS2,RGS4,RGS13,RGS16,RIT1,RNASEL,RNF2,RORC,RPS27,RXRG,S100A1,S100A2,S100A3,S100A4,S100A5,S100A6,S100A7,S100A8,S100A9,S100A10,S100A11,S100A12,S100A13,XCL1,SELE,SELL,SELP,SHC1,SLAMF1,SOAT1,UAP1,SPRR1A,SPRR1B,SPRR2A,SPRR2D,SPRR2E,SPRR2F,SPRR2G,SPRR3,SPTA1,TROVE2,SSR2,XCL2,VPS72,THBS3,TCHH,TNR,TPM3,TPR,CCT3,TUFT1,TNFSF4,USF1,DAP3,NPHS2,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,TAGLN2,ANXA9,RGS5,ITGA10,BLZF1,VAMP4,PEA15,B4GALT3,B3GALT2,ADAM15,PEX11B,CREG1,CD84,SELENBP1,MPZL1,SH2D2A,ANGPTL1,TBX19,PRPF3,ARHGEF2,DEDD,XPR1,GPR52,AIM2,RASAL2,CHD1L,PRDX6,PDE4DIP,SLC25A44,KIAA0040,NOS1AP,ARHGEF11,CEP350,SETDB1,SMG7,UBAP2L,SV2A,DENND4B,RABGAP1L,FAM20B,RBM8A,NR1I3,SCAMP3,ARPC5,PRG4,GPA33,STX6,SF3B4,PIAS3,HAX1,C1ORF61,SEMA6C,SLC19A2,POLR3C,IVNS1ABP,TXNIP,PMVK,FAM189B,NES,CFHR4,CFHR3,OCLM,JTB,MTMR11,SLC27A3,TDRKH,CD160,PMF1,DUSP12,VPS45,KIAA0907,KIFAP3,ATF6,NMNAT2,POGZ,COLGALT2,RGL1,SYT11,PRRC2C,RPRD2,SMG5,NCSTN,CRB1,GPR161,SNAPIN,RUSC1,CA14,CCDC19,NBPF14,MPC2,OLFML2B,C1ORF43,DNM3,TOR1AIP1,CHTOP,LCE2B,OR10J1,USP21,CACYBP,SLC39A1,KLHL20,LAMTOR2,TMOD4,NME7,CERS2,CRNN,GLRX2,BOLA1,ZBTB7B,RRNAD1,APH1A,PLEKHO1,IER5,UCHL5,SUCO,GPR89B,HSD17B7,UFC1,METTL13,OAZ3,CD244,DPM3,MRPS21,ADAMTSL4,CRCT1,SWT1,GON4L,GPATCH4,DUSP23,C1ORF27,C1ORF56,RALGPS2,MSTO1,DARS2,GOLPH3L,KIRREL,YY1AP1,UBE2Q1,ITLN1,FAM63A,ADCY10,DCAF6,ASH1L,LENEP,SLC50A1,SLAMF8,CDC42SE1,UBQLN4,LHX9,RAB25,PGLYRP4,RHBG,SCYL3,ATP8B2,VANGL2,PBXIP1,S100A14,GATAD2B,CGN,IGSF9,ZNF687,HCN3,FAM5B,CCDC181,SLAMF7,CADM3,PRUNE,HAPLN2,PAPPA2,BCAN,TNN,MRPS14,SEMA4A,RFWD2,RGS18,MRPL9,INTS3,SCNM1,FCRL2,CDC73,MRPL24,TNFAIP8L2,C1ORF54,PAQR6,TRIM46,MROH9,TARS2,EDEM3,FLAD1,NPL,OR6N2,OR6K2,CFHR5,C1ORF21,PVRL4,SNX27,ANP32E,SHCBP1L,TRMT1L,ISG20L2,FCRL5,FCRL4,NUF2,HMCN1,TEX35,HORMAD1,TOMM40L,POLR3GL,TMEM79,ACBD6,ZBTB37,LCE3D,FCRLA,MAEL,RGS8,SEC16B,AQP10,SLAMF9,PYGO2,NUP210L,CENPL,DUSP27,RCSD1,MEX3A,METTL18,GORAB,C1ORF105,PIGM,IGSF8,C1ORF85,PGLYRP3,SLAMF6,FCRL1,FCRL3,FMO9P,TSEN15,FAM129A,TADA1,SH2D1B,GABPB2,TCHHL1,RPTN,TDRD10,SHE,KLHDC9,AXDND1,ATP6V1G3,OR10J5,DCST2,ZNF648,TEDDM1,UHMK1,FCRLB,LIX1L,TSACC,IQGAP3,APOA1BP,OR10T2,OR6P1,OR10X1,OR10Z1,OR6K6,OR6N1,S100A16,NEK7,ITLN2,CREB3L4,C1ORF51,HFE2,ANKRD35,FAM163A,NBPF12,LELP1,RC3H1,DCST1,METTL11B,FAM78B,BNIPL,LRRC71,PYHIN1,DENND1B,TDRD5,TOR1AIP2,SPRR4,PPIAL4A,TTC24,LCE4A,NBPF11,KRTCAP2,CRTC2,LCE5A,ARHGAP30,C1ORF192,ASPM,TIPRL,RIIAD1,THEM5,SLC9C2,NBPF16,ANKRD34A,C1ORF204,HIST2H2AB,S100A7A,RXFP4,FAM5C,C1ORF110,OR10R2,FCRL6,KCNT2,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,RGSL1,ZBTB41,PEAR1,ILDR2,NOTCH2NL,LYSMD1,HRNR,FLG2,FMO6P,LINC00272,C1ORF53,VHLL,OR10K2,OR10K1,OR6Y1,OR6K3,VSIG8,C1ORF226,C1ORF220,NBPF9,APOBEC4,MIR181B1,MIR199A2,MIR181A1,MIR214,RGS21,HIST2H2BF,ETV3L,LRRC52,OR10J3,KPRP,LCE6A,HIST2H4B,PRR9,PPIAL4G,PPIAL4D,PPIAL4B,GPR89A,PPIAL4C,HIST2H3D,FAM72B,PCP4L1,MIR557,MIR92B,HIST2H2AA4,FAM72D,GPR89C,MIR190B,C1ORF68,TSTD1,C2CD4D,NBPF20,MIR1295A,MIR4257,MIR4424