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Add organisms to database

Usage

addOrganism(conn_handler, organism_tbl, verbose = TRUE)

Arguments

conn_handler

An R object obtained from SigRepo::newConnhandler() (required)

organism_tbl

A Data Frame; Must contain the following column names: organism, biomart_db, biomart_dataset, biomart_description, biomart_version, biomart_updated_date, prot_organism_code, prot_organism_taxid, prot_updated_date (required)

verbose

Logical; whether to print diagnostic messages. Defaults to 'TRUE'

Examples