addMetabolomicsSignatureSet — addMetabolomicsSignatureSet • SigRepo

Add metabolomics signature feature set to database.

Usage

addMetabolomicsSignatureSet(
  conn_handler = NULL,
  signature_id,
  signature_set,
  feature_database,
  verbose = TRUE
)

conn_handler: Optional R object obtained from SigRepo::newConnhandler(). If NULL, the stored internal handle is used.
signature_id: Database ID of the signature (required)
signature_set: A Data Frame; must contain the following column names: feature_name, probe_id, score, group_label (required)
feature_database: Metabolomics dictionary used by the incoming signature's feature_name column. One of refmet_id, refmet, hmdb, smiles, or inchikey. If feature_database = "refmet" and signature_set also contains refmet_id, those IDs are preferred for lookup over feature_name.
verbose: Logical; whether to print diagnostic messages. Defaults to 'TRUE'